For self-employed locum pharmacists

MTD for Income Tax for locum pharmacists.

Day rates across several pharmacies, agency and direct bookings, mileage and GPhC fees. Here's how Making Tax Digital for Income Tax affects locum pharmacists, and why almost all of you are in scope now.

Does this apply to me?

Almost all locum pharmacists are in scope now.

MTD for Income Tax is measured on gross self-employed income before expenses. On typical locum day rates, a full year is comfortably over £50,000.

Live now
£50,000
Gross income from April 2026
£30,000
Threshold from April 2027
£20,000
Threshold from April 2028
Many bookers, one record

Three pharmacies or ten, it's one set of books.

Locum income arrives from lots of places, but it's all your self-employed income. Clear Books pulls every booking into one running record and one quarterly update, so multiple bookers never means multiple headaches.

What records you need
What's changing

Digital records, four quarterly updates, one final declaration.

Your annual Self Assessment return is replaced by four short quarterly updates and a year-end final declaration, all through recognised software.

What to keep digital

  • Day-rate income from every pharmacy
  • Any agency fees deducted
  • Mileage and travel to bookings
  • Overnight accommodation for distant shifts
  • GPhC registration and indemnity
  • CPD and professional membership

Log each booking as you complete it so your quarterly total matches the shifts you actually worked.

  • Multiple bookers Reconciled into one update
  • Agency fees Recorded as expenses
  • Travel Mileage and accommodation deductible
The locum detail

The bits specific to locum pharmacy.

Many income sources

Every pharmacy and agency is one income stream. Recorded together, they total into a single quarterly update.

Agency vs direct

However a shift is booked, it's your income. Any agency fee is an expense you record against it.

Mileage and stays

Travel to bookings and overnight stays for distant shifts are generally deductible. Log them as you go.

GPhC and indemnity

Registration and indemnity are deductible. Keep them recorded so nothing is missed at year-end.

Why Clear Books

One place for every booking.

You shouldn't need a spreadsheet per pharmacy. Clear Books pulls all your locum income together and gives HMRC exactly what MTD requires.

  • Record day-rate income from every booker
  • Log agency fees as expenses
  • Track mileage and accommodation
  • Keep GPhC and indemnity costs recorded
  • Send HMRC-compliant quarterly updates in minutes
  • Free plan available, no timer
The Clear Books MTD for Income Tax submissions screen showing four quarterly updates submitted to HMRC
Q1 update submitted
HMRC recognised
Common questions

Locum pharmacist MTD FAQ.

Do locum pharmacists have to use MTD for Income Tax?
Almost all locum pharmacists earn over £50,000, so it applies from 6 April 2026. The threshold drops to £30,000 from April 2027 and £20,000 from April 2028.
I work at several pharmacies, is that lots of admin?
No. All your locum income sits in one set of self-employed records. Clear Books totals it into a single quarterly update, so you review once and submit.
Does agency versus direct booking change anything?
It's all self-employed income to you. You record the payment either way, and any agency fee deducted is a business expense.
Can I claim mileage and accommodation?
Yes. Travel to bookings, including mileage and overnight accommodation for distant shifts, is generally deductible. Recording it digitally keeps your quarterly figures accurate.
What professional costs can I claim?
Typical costs include GPhC registration, professional indemnity, CPD and training, and professional body membership, alongside your travel and accommodation.
Free for self-employed locums

Every booking in one place.

Record your shifts and travel as you go, and send your first quarterly update in minutes.